EURING Analytical Meeting & Workshop

   17-21 April, 2023 • Montpellier, France

EURING 2023 • Montpellier, France • honour & plenary presentations

The EURING 2023 Analytical Meeting & Workshop is highlighted by a series of plenary presentations, which are intended to present expert summaries of various areas of current research interest.

 

Honour Speaker:   Emmanuelle Cam   (Monday, 17 April - 5:30-6:30 PM)

'30 years of data collection, capture-mark-recapture (CMR) modeling and teaching: what is seen matters, what is unseen matters as much, and sometimes we estimate quantities that are unobservable.'

Biography

Dr. Emmanuelle Cam has been a professor at the University of Western Britanny (Brest, France) since 2017. She is a population ecologist who combines fieldwork and statistical modeling to address the demographic processes underlying population dynamics. She is involved in a kittiwake (Rissa tridactyla) monitoring program based on individually marked birds (1979 to the present). The primary theme of her research focuses on variation in individual decisions (breeding or not, timing of breeding, mate and site fidelity) according to ontogenetic factors and social or environmental conditions, and on individual responses to changing conditions. She teaches courses on population dynamics, evolutionary ecology, applied modeling for conservation biology, and a specific course on modeling for the conservation of marine megafauna (International Master of Science in Marine Biological Resources). Before that (2002-2017) she was an associate professor and then a professor at the University of Toulouse (France). Prior to 2017 she was a post-doctoral fellow with the biometry group at Patuxent Wildlife Research Center (U.S.A), with the Center for Wildlife Ecology at Simon Fraser University (Canada), and with the Ecology and Evolution group at the Mediterranean Institute for Advanced Studies (Spain). She has MSc degree (1993) and a PhD in ecology (1997) from Pierre and Marie Curie University in (Paris, France).

Abstract

In the 20th century, the probability of a young biologist with a basic training in statistics successfully building the CMR models required to address ambitious hypotheses based on ecological or evolutionary theory was small. The situation has changed thanks to the amazing dynamism of researchers involved in the development of CMR models, pieces of software, courses offered in universities and workshops worldwide, and the publication of papers and textbooks. EURING Analytical meetings have played a large part in the sustained dynamics of the community of statisticians and biologists using CMR models. As a user, studying how to design CMR models brings you more than 'recipes' to overcome problems inherent in imperfect detection of marked individuals. For example, any piece of software designed to build CMR models includes tools to conduct model selection based on Information Criteria because leading researchers have popularized this approach to assess hypotheses about the processes that give rise to data. Kendall and Gould (2002) published an opinion paper focused on the curriculum of wildlife students and highlighted difficulties that are still true: 'Relating statistics to scientific methodology is a good idea in any case... However, the more this is necessary, the fewer statistical topics can be covered. In addition, by teaching scientific methods in a statistics course, we have found students can misinterpret the differences between scientific hypotheses and statistical hypotheses.' The constant innovation in CMR modeling has widened the gap between modern concepts and techniques and the basic training of students. Teaching CMR modeling is a fantastic means of opening the students' minds to complex ideas: 'what is seen matters, what is unseen matters, and sometimes you estimate quantities that remain unobservable even if you use the most efficient tools of investigation of micro- and macroscopic processes governing the state of Nature.' The integration of occupancy and CMR models within the common framework of hidden Markov models, combined with flexible programming languages has created an imposing background that leads to numerous publications that even the most 'statophobic' student can't ignore today. Long-term monitoring programs of individually marked animals have tremendously benefited from innovation in CMR modeling: ecological or evolutionary hypotheses that were impossible to address can now be evaluated. New results have raised new questions and highlighted new obstacles. From the biologist's viewpoint, some innovations in CMR modeling such as the estimation of model parameters that are impossible to measure even with perfect detectability can be difficult to advocate in the ecology or evolution literature due to a lack of familiarity of many biologists with the way we draw inferences about ecological or evolutionary hypotheses using data and CMR models, and because there is ongoing debate in biology concerning the interpretation of some models. This sheds light on the twofold challenge that biologists must overcome and that teachers must help students overcome: the more powerful the technology becomes (fast computers, flexible programming languages, efficient algorithms to estimate the parameters of complex models), the deeper our understanding of the conceptual foundations of both ecology or evolution and statistics must be.

 

Todd Arnold   (Friday, 21 April)

'Density dependence, individual heterogeneity, and demographic
compensation: new approaches to age-old questions.'

Biography

Dr. Todd Arnold is a Morse Distinguished Teaching Professor in the Department of Fisheries, Wildlife and Conservation Biology at the University of Minnesota, USA. He received his Ph.D. in Zoology from Western University in Ontario, Canada, where he conducted dissertation research on the adaptive significance of clutch size in American coots. Current research interests focus on developing better methods of estimating population size of secretive wildlife, estimation of population vital rates such as nest success and annual survival, and development of integrated population models to better guide conservation activities.

Abstract

Understanding the impacts of human harvest on population dynamics was a key motivation behind the development of modern tag-recovery models, and the general framework can be expanded to address any source of natural or anthropogenic mortality of interest. Mortality sources are considered additive if they lead to a net reduction in annual survival that cannot be ameliorated over the course of the annual cycle, or fully compensatory if the reduction is completely ameliorated through increases in natural survival. Compensation can also occur if harvest mortality falls disproportionately upon frail individuals that were less likely to survive anyway. Additive and compensatory mortality are reference points along a continuum, and methods to estimate partial compensation are sorely needed. I review previous analytical approaches and propose an alternative method that estimates annual survival as a function of harvest mortality. If harvest or other anthropogenic mortality sources are seasonally restricted, then models that allow annual mortality to be partitioned into seasonal hazard rates (rather than annual survival probabilities) further facilitates assessment of compensatory mechanisms, as do integrated population models (IPMs) that allow compensation to occur via other vital rates (e.g., fecundity or immigration). IPMs also facilitate direct assessment of density-dependent relationships that might promote demographic compensation. However, identifying demographic compensation is complicated by temporal and individual variation in vital rates, and I hope to inspire audience members to help address many of the remaining important questions.

 

Marlène Gamelon   (Thursday, 20 April)

'Biotic interactions matter: how intra- and interspecific
competition shape vital rates and population dynamics.'

Biography

Dr. Marlène Gamelon is a researcher at the Centre National de la Recherche Scientifique (CNRS) in the Biometry and Evolutionary Biology Lab (LBBE) in Lyon, France and at the Centre for Biodiversity Dynamics at the University of Science and Technology (NTNU) in Trondheim, Norway. She is a population ecologist interested in understanding how free-ranging animal populations respond to environmental changes, including abiotic (climate conditions), anthropogenic (harvest), and biotic (intra- and interspecific interactions) factors. She uses modelling approaches to study how these factors shape phenotypic traits, demographic rates and population growth rate. Her research primarily relies on individual long-term monitoring of natural populations of birds and mammals, with implications in conservation and management.

Abstract

Understanding components of intra- and interspecific competition is a major goal in ecological studies. Classical approaches for the analyses of density dependence typically consider equal responses and contribution of all individuals to density dependence. However, in age-structured populations, individuals of different ages may differ in their responses to changes in population size and how they contribute to density dependence affecting the growth rate of the whole population. Based on the long-term individual monitoring of sympatric competing species at several locations across Europe, we analyzed capture-mark-recapture data to assess how vital rates (e.g. survival, reproduction) and population growth rate of the focal species are affected by intra- and interspecific competition. We provide evidence for age-dependent responses and effects of intra- and interspecific competition. Accounting for both age structure and biotic interactions greatly improve predictions of annual variations in population size.

 

Alison Johnston   (Monday, 17 April)

'People and birds: The challenges and power of
citizen science data in ornithology.'

Biography

Dr Alison Johnston is a Reader in Statistics, based at the Centre for Research in Ecological and Environmental Modelling at the University of St Andrews, UK. She is an ecological statistician with broad interests in how we can use creative analytical methods to learn more about the natural world, to understand the drivers of ecological changes, and to prioritise conservation action. Most of her research has focussed on birds, with particular emphasis on citizen/community science data, however she has also worked with a broad range of other data including mark-recapture data, nest data, tagging data, aerial survey data, and acoustic data. She uses a combination of both statistical and machine learning methods.

Abstract

Humans have a close relationship with birds, which has led to a long history of citizen/community science data contributing to ornithological advances. However, the last couple of decades have seen a rapid expansion in observational data collected by volunteers in ornithology, driven by the growth of simpler and more flexible projects that allow a broad spectrum of participation. The resulting datasets have huge power to expand our knowledge of bird distributions, migration routes, and population trends. However, to extract reliable ecological knowledge, we need to address the numerous challenges that arise from these data and that can bias the ecological inference. It also requires the development and application of robust analytical approaches to account for these sources of variation during data analysis. However, this work requires us to understand people and how they relate to and record birds. Overall, there is a huge potential to use these large, messy, observational datasets to fill gaps in our ornithological knowledge and strengthen ecological inference using CS data. To achieve these goals, we need to develop robust analytical approaches, built on the foundation of the relationship between people and birds.

 

Aline Magdalena Lee   (Wednesday, 18 April)

'The magic of mark-recapture.'

Biography

Dr. Aline Magdalena Lee is an associate professor and researcher at the Center for Biodiversity Dynamics at the Norwegian University of Science and Technology. Previously, she has been based at the University of California, Berkeley, and the University of Aberdeen, Scotland. Her main research interest is understanding stochastic population and extinction dynamics within ecological communities. She has worked with a wide range of species and systems, ranging from marine fish and daphnia to birds and ungulates. Combining theoretical modeling with empirical data analysis is a central theme in her research. She has a particular fondness for methods that can extract additional information from limited data, and for studies that attempt to uncover general ecological processes while also teaching us about specific systems and species. She regularly uses mark-recapture models and integrated population models in her work, alongside other methods.

Abstract

Methods for analyzing mark-recapture data have developed rapidly in recent decades and the amount and type of information that can be extracted from such data is constantly increasing. At times, it can seem almost like magic. How can users that don't necessarily understand all the details of the underlying math and coding be sure their analyses are in fact doing what they think they are? How do we know whether we can trust our results? In this presentation I will use examples from my work to discuss a few of the magical things that methods such as integrated population modeling and multievent modeling can achieve, while demonstrating some ways that we can test whether our results are in fact telling us what we think they are.

 

Matthieu Paquet   (Tuesday, 18 April)

'Estimating immigration and density dependence
using Integrated Population Models.'

Biography

Dr. Matthieu Paquet is interested in behavioral ecology and population dynamics and aims to better understand and predict population fluctuations by integrating information on interactions within (e.g. parental effects and social behaviour) as well as among species (e.g. competition and predation), notably using Integrated Population Models.

Abstract

By combining several data sources that contain information on demographic parameters and population size, Integrated Population Models (IPMs) have allowed us to i) jointly estimate population size and demographic parameters, and therefore density dependent effects on the demographic parameters, ii) estimate parameters for which explicit data is hard to collect (e.g. immigration), and iii) estimate the contribution of demographic parameters (and to some extent population size and other covariates) to variation in population growth, in a unified statistical framework. I will briefly review recent developments, and pinpoint some challenges, in the use of IPMs for estimating immigration and (intra and interspecies) density dependence, and their potential importance as drivers of population dynamics.