Project keeps vanishing

announcements (new versions, changes, bugs, installation problems...) related to program PRESENCE

Project keeps vanishing

Postby Lea » Fri Nov 01, 2013 12:03 pm

Hi there, I am using Presence 5.8 and my project keeps dissapearing. When I open the project file everything seems to be there and I can open the OUT files. But when i open the project in Presence no models show up and I when I open the design matrix and click on retreive model nothing happens. The design matrix also says two species, single season when I have been running multiseason models (not sure if this is related). The data file seems to open fine. After this happened the last time I started a new project and reran all of my models. When I opened the new project later in the day it had vanished again. (Bangs head on desk).
Any help would be appreciated!
Thanks,
Lea
Lea
 
Posts: 32
Joined: Thu Oct 24, 2013 1:09 pm

Re: Project keeps vanishing

Postby Lea » Mon Nov 04, 2013 4:52 pm

I tried the rebuild project from out files and it only brought back my top model. I installed Presence 6.1 hoping it would fix the problem and now I can't even get it to run a simple model. I will give it a try on another computer but this is the message that shows up in the black box:

arg><
read_pao_file:data_filename.text=C:\Users\lear\Desktop\working\backup\~U-drive\L
eaR\Frogs\Analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ.pao
datadir=C:\Users\lear\Desktop\working\backup\~U-drive\LeaR\Frogs\Analysis\2013\s
pring&summer\cov_occ\spr_summ_project
curdir =C:\Users\lear\Desktop\working\backup\~U-drive\LeaR\Frogs\Analysis\2013\s
pring&summer\cov_occ\spr_summ_project
reading C:\Users\lear\Desktop\working\backup\~U-drive\LeaR\Frogs\Analysis\2013\s
pring&summer\cov_occ\spr_summ_project\spr_summ.pao...
nsites=68 noccasions=40
sitecov:Obs
sitecov:HSI
sitecov:HSI*2
sitecov:C4
68 lines read, maxstate=1 nsitecov=4 nsampcov=20
title:spr&summ
--------------------
ok_click results_filename=c:\users\lear\desktop\working\backup\~u-drive\lear\fro
gs\analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ.pa3
calling create_proj_folder...
create_proj_folder: hname=c:\users\lear\desktop\working\backup\~u-drive\lear\fro
gs\analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ.pa3
project_folder=c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis
\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project
OK to create folder c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\ana
lysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project?
creating c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\
spring&summer\cov_occ\spr_summ_project\spr_summ_project
delete /s c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013
\spring&summer\cov_occ\spr_summ_project\spr_summ_project
mkdir c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\spr
ing&summer\cov_occ\spr_summ_project\spr_summ_project
opening spr_summ.pao
copying spr_summ.pao to c:\users\lear\desktop\working\backup\~u-drive\lear\frogs
\analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.
pao
delete... spr_summ.pao
chdir c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\spr
ing&summer\cov_occ\spr_summ_project\spr_summ_project
results_filename:c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analys
is\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pa3
create_pa3_file: data_filename.text=c:\users\lear\desktop\working\backup\~u-driv
e\lear\frogs\analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_proje
ct\spr_summ.pao
open_proj(c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013
\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pa3)
read_pao_file:data_filename.text=c:\users\lear\desktop\working\backup\~u-drive\l
ear\frogs\analysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project\
spr_summ.pao
datadir=c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\s
pring&summer\cov_occ\spr_summ_project\spr_summ_project
curdir =c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\s
pring&summer\cov_occ\spr_summ_project\spr_summ_project
reading c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\s
pring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pao...
nsites=68 noccasions=40
k=4
k=5
k=6
k=7
k=8
k=9
k=10
k=11
k=12
k=13
k=14
k=15
k=16
k=17
k=18
k=19
k=20
k=21
k=22
k=23
k=24
k=25
k=26
k=27
sitecov:Obs
sitecov:HSI
sitecov:HSI*2
sitecov:C4
68 lines read, maxstate=1 nsitecov=4 nsampcov=20
title:spr&summ
>>>Opening... c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\
2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pa3
ll=11
>>TITLE:spr&summ
l=14 i=6 s=TITLE:spr&summ
>>DATAFILE:c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\201
3\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pao
l=148 i=9 s=DATAFILE:c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\an
alysis\2013\spring&summer\cov_occ\spr_summ_project\spr_summ_project\spr_summ.pao

>>SITECOVFILE:
l=12 i=12 s=SITECOVFILE:
>>NSITES:68
l=9 i=7 s=NSITES:68
>>NSURVEYS:40
l=11 i=9 s=NSURVEYS:40
>>NRVY/SEASON:4
l=13 i=12 s=NRVY/SEASON:4
>>NSITECOV:4
l=10 i=9 s=NSITECOV:4
>>NSRVYCOV:20
l=11 i=9 s=NSRVYCOV:20
>>CSUM:0
l=6 i=5 s=CSUM:0
>>NEIGHBORFILE:
l=13 i=13 s=NEIGHBORFILE:
>>LASTMODEL:0000
l=14 i=10 s=LASTMODEL:0000
11 lines read
sortbyaic...
close h
curdir:c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\sp
ring&summer\cov_occ\spr_summ_project\spr_summ_project
C:\Progra~1 (x86)\Presence\zip -9vj presence_backup1 pres_*.out *.pao *.pa3
save_results_file: data_filename.text=spr_summ.pao
l=2
curdir==c:\users\lear\desktop\working\backup\~u-drive\lear\frogs\analysis\2013\s
pring&summer\cov_occ\spr_summ_project\spr_summ_project
scname=
-,a1,
psi1,1,
-,b1,
gam1,1,
gam2,1,
gam3,1,
gam4,1,
gam5,1,
gam6,1,
gam7,1,
gam8,1,
gam9,1,
-,c1,
eps1,1,
eps2,1,
eps3,1,
eps4,1,
eps5,1,
eps6,1,
eps7,1,
eps8,1,
eps9,1,
-,d1,
P[1-1],1,
P[1-2],1,
P[1-3],1,
P[1-4],1,
P[2-1],1,
P[2-2],1,
P[2-3],1,
P[2-4],1,
P[3-1],1,
P[3-2],1,
P[3-3],1,
P[3-4],1,
P[4-1],1,
P[4-2],1,
P[4-3],1,
P[4-4],1,
P[5-1],1,
P[5-2],1,
P[5-3],1,
P[5-4],1,
P[6-1],1,
P[6-2],1,
P[6-3],1,
P[6-4],1,
P[7-1],1,
P[7-2],1,
P[7-3],1,
P[7-4],1,
P[8-1],1,
P[8-2],1,
P[8-3],1,
P[8-4],1,
P[9-1],1,
P[9-2],1,
P[9-3],1,
P[9-4],1,
P[10-1],1,
P[10-2],1,
P[10-3],1,
P[10-4],1,
4 0 0
5 0 0
delete presence_error.txt "pres_psi_gamma()_eps()_p().out"
C:\Progra~1 (x86)\Presence\presence.exe i="spr_summ.pao" l="pres_psi_gamma()_eps
()_p().out" name="psi,gamma(),eps(),p()" model=200 j="c:\users\lear\desktop\work
ing\backup\~u-drive\lear\frogs\analysis\2013\spring&summer\cov_occ\spr_summ_proj
ect\spr_summ_project\spr_summ.dm" lmt=200
opening:pres_psi_gamma()_eps()_p().out
Lea
 
Posts: 32
Joined: Thu Oct 24, 2013 1:09 pm

Re: Project keeps vanishing

Postby Lea » Mon Nov 18, 2013 12:07 pm

Well my project still keeps vanishing but I figured out how to rebuild the project from the OUT files and figured I would share in case anyone else has the same problems. The trick is to copy the OUT files and the .Pao to a different location and delete the project folder. Create a new project using the existing .Pao and then paste the OUT files back into the new project folder. Then you can go to tools<rebuild project from OUT files and all should restored.
Lea
 
Posts: 32
Joined: Thu Oct 24, 2013 1:09 pm


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