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Plenary Address - 8:15-8:55 AM
Using Mark-Recapture to Study Social Behavior: A Case Study of Cliff Swallows
Charles Brown
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Mark-recapture methods are being increasingly applied to problems in ecology, evolution,
and behavior. These methods and the analytical tools associated with them can provide
important insight into issues that field biologists have grappled with for decades, such
as estimating population size, survival probabilities as a component of fitness,
dispersal, and recruitment and the likelihood of breeding. But effective use of
mark-recapture methods usually requires a long-term data set, with animals followed over
multiple capture periods, and a relatively large number of marked individuals for
estimation of multiple parameters and the effects upon them. These constraints often
limit the application of these methods, especially in behavioral ecology. Using a
22-year field project on colonially nesting cliff swallows (Petrochelidon
pyrrhonota)
that has included over 148,000 marked individuals, I illustrate the insights into social
behavior and coloniality that have been made possible by mark-recapture. Specifically,
I will explore how annual survival probability has increased our understanding of
fitness associated with different clutch sizes, laying dates, and alternative
reproductive strategies; how estimating the presence of transient birds from
mark-recapture has been applied to studies of between-group parasite transmission; and
how daily survival probability during the breeding season can integrate the disparate
costs and benefits of coloniality. Future work for both swallows and other species
should emphasize multistate analyses so that between-year survival and movement as a
function of a bird's group size in different years can be estimated.
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Individual Papers
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8:55-9:20 AM
Effects of Spring conditions on breeding propensity of Greater Snow Goose females
- Eric Reed, Gilles Gauthier & Jean-Francois Giroux
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Breeding propensity, the probability that a sexually mature adult will breed
in a given year, is an important determinant of annual productivity. It is
also one of the least known demographic parameters in vertebrates. Although
recent methodological advances in mark-recapture methods have allowed the
estimation of breeding propensity for some bird species, little is known about
factors responsible for temporal variation in this parameter. We studied the
relationship between breeding propensity and conditions encountered on the
spring staging areas and the breeding grounds in Greater Snow Geese (Chen
caerulescens atlantica), a long distance migrant that breeds in the High
Arctic. We used an Robust Design approach where classic capture histories were
combined with auxiliary information from radio-marked birds and nest survey
data to estimate breeding propensity over a 7-year period. More specifically,
mark-recapture data was used to estimate probabilities of capture if alive and
present in the superpopulation, and information from radio-marked birds was
used to estimate probabilities of capture given presence in the sampled area.
We also had to correct our estimates for nest success, because failed nesters
emigrated from the sampled area, and incomplete fidelity to brood rearing
areas (i.e. sampling area). We tested the effects of spring snow cover and a
spring conservation hunt on breeding propensity using a weighted least squares
approach. We also used an empirical variance-components approach and
determined that true temporal variation in breeding propensity was
considerable (mean breeding propensity: 0.574 [95% CI considering only process
variation: 0.13 to 1]). Spring snow cover was negatively related to breeding
propensity (βsnow = -2.05 ± 0.96 SE) and tended to be reduced
in years
with a
spring hunt (β = -0.78 ± 0.35). Nest densities on the breeding colony
and fall
young/adult ratio were good indices of breeding propensity, with nest
densities being slightly more precise. These results suggest that
environmental conditions and disturbance encountered during the pre-breeding
period can have a significant impact on productivity of Arctic-nesting birds.
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9:20-9:45 AM
Earlier recruitment
or earlier
death? On assumptions of homogeneous survival rates in
capture-recapture models to
estimate recruitment - Emmanuelle Cam, Evan Cooch & Jean-Yves Monnat
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Realized patterns of age of recruitment observed in the breeding segment of
populations are governed by the product of two demographic components:
[survival probability from birth to age ]*[transition probability from state
prebreeder to state first-time breeder at age ]. To again insight into
selective pressures shaping age of recruitment, one may address temporal
variation in age of first breeding and covariation with population size or
social and environmental factors. This involves comparison among "groups"
(e.g., cohorts) of individuals encountering different environmental conditions
when they reach a given age as prebreeders.
However, measures of recruitment
based exclusively on data from the breeding segment of the population ignore
the size of the pool of prebreeders (as opposed to transition probability).
However, in a large number of species with deferred breeding, individuals are
not encountered prior to breeding. Approaches to estimating age-specific
recruitment probability in the absence of data from prebreeders using
mark-recapture have been developed (Pradel and Lebreton 1999, Schwarz and
Arnasson 2001, Williams et al. 2002). Unless the survival component of
realized age-specific recruitment rates is known to be identical among the
groups compared, inferences about the "cause" of variation in realized age of
first breeding among groups are difficult: such differences may in fact result
from differences in survival probability before individuals make the
transition between states. Inferences about differences in realized
recruitment rates among groups exclusively based on data from the breeding
segment of the population reflect differences in recruitment probability under
the assumption that there is no difference in prebreeder survival among these
groups.
We assessed the consequences of violations of this assumption on our
perception of age-specific realized recruitment rates using numerical
simulations; the scenarios considered correspond to various biological
hypotheses about group-specific variation in survival and transition
probabilities. Data were simulated under regular multistate models (Nichols
and Kendall 1995) and truncated individual histories were then analyzed using
the reverse-time approach (Pradel 1996) and the approach developed by Schwarz
and Arnasson (2001). Depending on the scenario, realized recruitment was
delayed or advanced compared to the underlying pattern of age-specific
transition probabilities. We also addressed age-specific recruitment
probability in a long-lived seabird species, the kittiwake (Rissa tridactyla)
using a data set including data from prebreeders. We compared results from the
reverse-time approach and the multistate approach, and showed that transition
probability directly estimated or derived from measures of recruitment based
on the breeding segment of the population are different.
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9:45-10:10 AM
Predictors of reproductive costs in Soay
sheep: a multistate
capture-recapture analysis
- Giacomo Tavecchia, T. Coulson, B.J.T. Morgan, J. Pemberton, J.
Pilkington &
T.H. Clutton-Brock
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We investigate factors influencing the shape of the trade-off between
survival and reproduction in female Soay sheep (Ovis aries). Multistate
capture-recapture models are used to incorporate the state-specific
recapture probability and to model the cost function directly from data on
marked individuals. The cost of reproduction is identified as a quadratic
function of the mother's age, being greatest for females breeding at the end
of their first year and when more than 7 years old. Furthermore, the cost is
only present during severe environmental conditions, when wet and cold
winters coincide with high population density. Population density and
winter severity negatively influence the probability of successfully
breeding in the first year of life. Finally, the recapture probability
depends on the breeding state: breeding females are virtually always
recaptured while non-breeding individuals are not. The significant
influence of the interaction between age and time on the phenotypic
trade-off function might be responsible for maintaining cohort differences
in demographic parameters. The use of multi-state capture-recapture analysis
has allowed us to draw
broader conclusions than earlier work, which was based on conditional
methods of analysis
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10:10-10:25 AM - break
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10:25-10:45 AM
Breeding cycles and reproductive
investment: the case of the
Leatherback sea turtle
- Philippe Rivalan, R. Pradel, R. Choquet, J.-P. Briane, M. Girondot
&
A.C. Prevot-Julliard
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An important demographic parameter is the trade-off between current and
future reproduction. A particular case is the relation between the number of
years without reproduction and reproductive investment in years with
reproduction.. We studied this trade-off in a long-lived species with
intermittent breeding, the leatherback sea turtle, in French Guiana.
Leatherback sea turtles lay several clutches within a reproductive year but
reproduce every two or more years. Female leatherback sea turtles were
captured, marked and recaptured when they lay eggs on nesting beach, from
1990 to 2002 (60,000 CMR events divided in two parts: (1) females marked
from 1990 to 1994 with monel tags and subject to high tag-loss rate; (2)
females marked from 1995 to 2002 with permanent pit-tags).
We modeled intermittent breeding and reproductive investment as following:
(1) We estimated the number of years without reproduction by using
multistate models incorporating several non-observable states using the
software M-Surge (Choquet et al. 2003). We included tag-loss probabilities
in
transition matrices for females marked from 1990 to 1994.
(2) We assessed investment in reproduction (i.e., number of clutches) by
estimating the duration of presence of females on the beach. This duration
is equivalent to a stopover duration of migrating birds. We estimated this
annual stopover duration of females on the beach using the software SODA
(Shaub et al. 2001).
We found two breeding strategies which have the same fitness, characterized
by the number of years without reproduction (2 or 3) and the number of
clutches within reproductive years. However, such strategies are not fixed
for a given female.
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10:45-11:05 AM
Modelling
senility and dispersal
of Red deer - Ted Catchpole, T.N. Coulson, Y. Fan, & B.J.T. Morgan
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Red deer(Cervus elaphus) on the island of Rum have been closely
studied for many years. In particular, this has resulted in an
extensive mark-recapture-recovery (mrr) data set. Models for these
data need an elaborate age-structure for survival, because deer react
differently to environmental factors at different stages of their
lives. An additional interesting feature of the data is that animals
may leave the study area. Thus we are interested not only in modelling
deer survival, but also deer dispersal. Our modeling approach is a
classical statistical one. The two sexes need to be considered
separately. Within each sex, we use standard likelihood tools and
information criteria to identify age-classes, separately for survival
and dispersal. Within each age-class, the relevant probability does
not vary over the ages desribed by that class, with the exception of
the oldest age-class for survival. This then allows us to undertake
logistic regressions of the relevant age-class probabilities on a
mixture of environmental and individual covariates. Senility, a
gradual decline in survival probability with age, is described by
means of a logistic regression on age within the oldest survival
age-classes for males and females. The final models that we select for
males and for females have an attractive simplicity. They demostrate
clearly the differences that exist between males and females, and may
be used for predicting future behaviour, and the effects of
alternative management policies.
The work of this paper is a natural extension of the models and
model-selection procedures that have been developed for Soay sheep
(Ovis aries) in Catchpole et al (2000) and Coulson et al (2001).
The
present work builds on the modelling of male red-deer alone by
Catchpole et al (2002), and the modelling of both sexes in Fan et al
(2002).
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11:05-11:25 AM
Assessing senescence
patterns in populations
of large mammals - Jean-Michel Gaillard & Anne Viallefont
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Theoretical models such as Gompertz and Weibull models are commonly used to
study senescence in survival for humans (Olshansky & Carnes 1997) and
laboratory or captive animals (Ricklefs 2000) for which a complete follow up
of individuals is available. For wild populations of vertebrates, senescence
in survival has more commonly been assessed by fitting simple linear or
quadratic relationships between survival and age (e. g., McDonald et al.
1996, Newton and Rothery 1997, Nichols et al. 1997, Loison et al. 1999). By
using appropriate constraints on survival parameters in
Capture-Mark-Recapture (CMR) models, we propose a first analysis of the
suitability of Gompertz and Weibull models for describing aging-related
mortality in free-ranging populations of ungulates. We first show how to
handle Gompertz and Weibull models in the context of CMR analyses. Then we
perform a comparative analysis of senescence patterns in both sexes of two
ungulate species highly contrasted according to the intensity of sexual
selection. Evolutionary implications of our results are discussed.
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11:25-11:45 AM
Breeding
site-fidelity and
survival estimation of a migratory songbird: implications
for conservation, life-history
and study designs - Duane Diefenbach, M.R. Marshall, L. Wood, & R.
Cooper
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We used data from a 5-year banding study of 423 Prothonotary Warblers
(Protonotaria citrea) from the White River National Wildlife Refuge,
Arkansas, USA to estimate annual apparent survival rates of adults. Also,
we documented inter-annual changes in the placement of breeding territories
to estimate emigration rates and distances moved. Recognizing that the
apparent survival estimates included both survival and permanent emigration,
and possibly temporary emigration, we simulated these movement patterns over
a range of true survival rates (0.3 - 0.9) to estimate the bias introduced
by emigration if apparent survival estimates were used as true survival rate
estimates. The simulations suggested that the observed warbler movements
resulted in apparent survival estimates, compared to true survival rates,
being 25% and 34% less (percent relative bias) for males and females,
respectively. Therefore, our observed apparent survival rates of 0.52 and
0.39 for male and female warblers, respectively, may represent true survival
rates of 0.69 and 0.60. Differential emigration rates confound inferences
regarding differences in apparent survival between sexes and among species.
Moreover, the bias introduced by using apparent survival rates for true
survival rates can have profound effects on the predictions of population
persistence through time, source/sink dynamics, and other aspects of
life-history theory. For instance, we demonstrate with a stochastic
population persistence model that if apparent survival rate estimates are
used as true survival estimates, the underestimate of true survival because
of emigration results in the misclassification of a local "source"
population as a "sink".
We investigated two study designs and analysis approaches that may result in
apparent survival estimates that are closer to true survival estimates. The
first involved a smaller "core" area where all marking of birds takes place
and progressively larger "resighting" areas surrounding the core where
researchers search for marked birds. We demonstrate that as the resighting
areas get progressively larger, and therefore incorporate more "emigrants,"
apparent survival estimates begin to approximate true survival rates.
Second, we investigated using a Robust Design data collection and analysis
approach to estimate emigration rates directly. Both approaches are limited
by logistical difficulties of data collection, but provide less biased
estimates of survival.
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